Education Day
Schedule: Education Day - PSI-2016
(12 – 13 December 2016)
Co-ordinators: Ravi Sirdeshmukh1,2 and Sanjeeva Srivastava3
1Institute of Bioinformatics (IOB), Bangalore
2Mazumdar Shaw Center for Translational Research (MSCTR), Bangalore
3Indian Institute of Technology Bombay (IITB), Mumbai
Monday, 12th December 2016
07:30-08:30 AM: Registrations
Time Speaker Title of the talk
08:30 - 08:35 AM Niranjan Chakraborty Welcome address
08:35 - 08:40 AM Subhra Chakraborty Introductory Remarks
08:40 – 08:50 AM SurekhaZingde Opening address
08:50 – 09:30 AM Ravi Sirdeshmukh Perspective of the Education Day Workshop
MODULE-I: GEL-BASED AND GEL-FREE PROTEOMICS USING MASS SPECTROMETRY
Chair: Ravi Sirdeshmukh
09:30 – 10:00 AM K. Dharmalingam Fundamentals of Quantitative Proteomics using 2D and 2D DIGE 
10:00 – 10:30 AM RenuDeswal Applications of Gel based Proteomics in Plants – Investigating Nitric oxide Signaling (Nitrosylation) in B.juncea
10:30 – 11:00 AM Tea break
11:00 – 11:30 AM Debasis Dash  Mass Spectrometry and Protein Identification 
11:30–12:00 PM DipankarMalakar Mass Spectrometry-based  Protein Quantitation Analysis 
MODULE-II: METABOLOMICS
Chair: Sixue Chen
12:05-12:35 PM Harsha Gowda Introduction to mass spectrometry based metabolomics 
12:35 – 1:05 PM Sixue Chen Quantitative Metabolomics Application for Plants using MS 
1:05 – 2:15 PM Lunch break
2:15 – 3:30 PM Amol Suryavanshi Demo Session: 2-DE Demo
3:30 – 4:00 PM Tea break
4:00 – 5:00 PM DipankarMalakar Demo Session: MS Data Analysis and Quantitation
Tuesday, 13th December 2016
MODULE-III: TARGETED PROTEOMICS 
Chair : Robert Moritz
9:00 – 9:30 AM Robert Moritz  Targeted Proteomics: TPP & SRM Atlas 
9:30 – 10:00 AM Srikanth Rapole Targeted proteomics for clinical applications 
10:00 – 10:20AM Mahesh Kulkarni Targeted Proteomics & PTMs 
10:20 – 10:40 AM Suman Thakur From Target to Validation: Proteomics in Clinical Research 
10:40 – 11:00 AM Tea break
MODULE-IV: STRUCTURAL PROTEOMICS &INTERACTOMICS
Chair : MA Vijayalakshmi
11:00 – 11:30 AM  Henning Hermjakob Interactions, Complexes, Pathways: Network context for molecular expression data
11:30 – 12:00PM Discussion Studying Interaction Using Proteomic Methods
12:00 – 12:30PM Tushar K. Maiti Chemical cross linking mass spectrometry in protein structure and molecular interaction
12:30 – 1:00PM M A Vijaya Lakshmi Separation technologies and role in proteomic analysis 
1:00 – 2:15 PM Lunch break
2:15 – 2:45 PM  Jason Chen Functional and Interaction Proteomics on a chip
2:45 – 3:15 PM Sanjeeva Srivastava Interactomics: Protein Microarrays and Surface Plasmon Resonance
3:15 – 3:45 PM Tea break
3:45 – 5:15 PM Interaction and discussion: Session moderated by Dr. Ravi Sirdeshmukh
5:15 – 5:20 PM Sanjeeva Srivastava Vote of thanks!