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 | Dr. Swarup K. Parida
Scientist V, FNA, FNASc, FNAAS
Ph.D. (Biotechnology), Jamia Hamdard University & National Institute for Plant
Biotechnology (NIPB), New Delhi
Post Doctoral Fellow, NIPB, New Delhi
Tel. No.: 91-11-26741612, 14, 17 (Ext. 228)
Direct: 91-11-26735228 Fax: 91-11-26741658
E-mail: swarup@nipgr.ac.in, swarupdbt@gmail.com
https://scholar.google.co.in/citations?user=K_CDT6IAAAAJ&hl=en
ORCID ID: https://orcid.org/0000-0001-7843-3031 |
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 Career |
 | Scientist V, National Institute of Plant Genome Research (NIPGR), New Delhi (2022 onwards) |
| Scientist IV, National Institute of Plant Genome Research (NIPGR), New Delhi (2018-21) |
| Scientist III, National Institute of Plant Genome Research (NIPGR), New Delhi (2014-18) |
| Scientist II, National Institute of Plant Genome Research (NIPGR), New Delhi (2011-14) |
| Post Doctoral Fellow, NIPB, New Delhi (2010-11) |
| Ph.D. (Biotechnology), Jamia Hamdard University & NIPB, New Delhi (2006-10) |
| M.Sc. (Agricultural Biotechnology), Indira Gandhi Agricultural University (IGAU), Raipur, Chhattisgarh (2001-03) |
| B.Sc. (Agriculture), Odisha University of Agriculture and Technology (OUAT), Bhubaneswar, Odisha (1997-2001) |
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| Honors and Fellowships |
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Fellow (FNA) of Indian National Science Academy (INSA) - 2022 |
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Fellow (FNASc) of National Academy of Sciences India (NASI) - 2018 |
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Fellow (FNAAS) of National Academy of Agricultural Sciences (NAAS) - 2019 |
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Member of Crop Science Society of America - 2018 |
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Member of Genetics Society of UK & USA - 2019 |
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| Awards & Recognition |
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Working Group Committee Member of NAAS-YUVA (Youth United for Visionary Agriculture) |
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Department of Biotechnology (DBT) S. Ramachandran-National Bioscience Award for Career Development - 2020 |
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Best Oral Presentation Award in Young Scientist Conference, under the Theme-Self-Reliant India, Session: Life Sciences in the Sixth edition of 'India International Science Festival (IISF-2020)', December 22-25, 2020. |
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NASI Reliance Industries Platinum Jubilee Award in Biological Sciences - 2019 |
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NAAS Associate Fellow - 2018 |
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ISCA Pran Vohra Award in Agricultural Sciences - 2018 |
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Odisha Bigyan Academy Samanta Chandra Sekhar Award in Science & Technology - 2018 |
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Indian Academy of Science Associate Fellow - 2018 |
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NASI Prof. B.K. Bachhawat Memorial Young Scientist Lecture Award - 2018 |
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IARI Dr. P.N. Bahl Award-IV for the Biennium 2018-19 |
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NASI Scopus Young Scientist Award - 2015 |
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Indian Genetics Congress (IGC) Researcher Award - 2015 |
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Odisha Bigyan Academy Young Scientist Award in 'Science & Technology'- 2014 |
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NAAS Young Scientist Award - 2013 |
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NASI Young Scientist Award - 2011 |
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| ISCA Young Scientist Award - 2011 |
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Indian Council of Agricultural Research (ICAR) Jawaharlal Nehru Award in Plant Biotechnology - 2011 |
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INSA Young Scientist Award - 2010 |
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National Eligibility Test (NET) & Graduate Aptitude Test in Engineering (GATE) in Life Sciences |
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Board of Research in Nuclear Sciences (BRNS) - Human Resource Development (HRD), Govt. of India Fellowship |
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All India Combined Biotechnology Entrance Examination (CEEB) M.Sc. (Agricultural Biotechnology) Merit Scholarship |
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OUAT Merit Scholarship |
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National Rural Talent Search (NRTS) Merit Scholarship |
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Life Member of Indian Science Congress Association (ISCA) |
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Life Member of Indian Society for Plant Biochemistry and Biotechnology |
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Life Member of Indian Society of Genetics and Plant Breeding |
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| Special Attainments |
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Associate/Handling Editors of Scientific Reports (Nature Publishing Group), BMC Genomics, BMC Plant Biology, PLOS ONE, Frontiers in Plant Science, Plant Molecular Biology Reporter, Molecular Breeding, Journal of Plant Biochemistry and Biotechnology, Journal of Plant Genomics, Journal of Genetics and Genomic Research & Express Biology |
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Associate Topic Editor of Scientific Reports for A Special issue on Research Topic "Seed Biology" (2022-23) |
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Associate Topic Editor of PLOS ONE for A Special issue on Research Topic "Future Crops" (2019-20) |
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Associate Topic Editor of Frontiers in Plant Sciences for A Special issue on Research Topic "Plant Translational Research in Genomics Era" (2016-17) |
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Member of ICAR for Developing National DNA Fingerprinting Protocols of Rice and Chickpea |
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Mentor and Expert Member in Department of Science and Technology (DST) INSPIRE (Innovation in science Pursuit for Inspired Research) Program |
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| Research Area |
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Genomics-assisted Breeding for Crop Improvement, Molecular Genetics, Plant Genomics, Agricultural Biotechnology |
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| Research Program |
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Next-generation molecular breeding for accelerated genetic improvement of major cereal and pulse food crops, rice and chickpea.
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Next-generation sequencing (NGS)-driven integrated genomics-assisted breeding strategy for rapid delineation of novel superior genes and natural alleles modulating traits of agronomic importance in order to accelerated efficient genetic dissection of complex quantitative abiotic stress tolerance as well as yield, plant architectural and nutritional quality traits for genetic improvement of rice and chickpea. |
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Marker (haplotype)-assisted breeding to develop early-flowering/maturing, climate-resilient, nutritionally-enriched, semi-dwarf and erect chickpea varieties with enhanced yield and productivity that are amenable to mechanical harvesting. |
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National Mission Mode Program on "Germplasm Characterization for Trait Discovery (DBT-Chickpea Mission Project)": Comprehensive phenotypic and genotypic characterization of germplasm resources conserved at ICRISAT and NBPGR Genebanks (Pan-Genebank Core) to identify novel superior genes/alleles governing traits of agronomic importance and promising trait-specific accessions (donors) for accelerating genomics-assisted crop improvement of chickpea. |
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Development of novel concepts, user-friendly databases, web-servers and cost-effective informative Arrays on various genetic markers designing and diverse integrated genomics-assisted breeding strategies for rapid quantitative dissection of complex seed yield and seed quality component traits aimed towards genetic enhancement of rice and chickpea. |
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| Group Members |
| Publications |
| Corresponding Author |
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Thakro V, Varshney N, Malik N, Daware A, Srivastava R, Mohanty JK, Basu U, Narnoliya L, Jha UC, Tripathi S, Tyagi AK, Parida SK (2024) Functional allele of a MATE gene selected during domestication modulates seed color in chickpea. The Plant Journal 117:53-71. |
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Malik N, Basu U, Srivastava R, Daware A, Ranjan R, Sharma A, Thakro V, Mohanty JK, Jha U, Tripathi S, Tyagi AK, Parida SK (2024) Natural alleles of Mediator subunit genes modulate plant height in chickpea. The Plant Journal 116:1271-1292. |
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Mohanty JK, Yadav A, Narnoliya L, Thakro V, Nayyar H, Dixit GP, Jha UC, Vara Prasad PV, Agarwal P, Parida SK (2024) A Next-Generation Combinatorial Genomic Strategy Scans Genomic Loci Governing Heat Stress Tolerance in Chickpea. Plant Cell Environment DOI: 10.1111/pce.15186. |
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Daware A, Mohanty JK, Narnoliya L, Singh A, Rathore D, Thakro V, Francis A, Singh NP, Francis P, Tripathi S, Chattopadhyay D, Parida SK (2024) Uncovering DNA methylation landscapes to decipher evolutionary footprints of phenotypic diversity in chickpea. DNA Research 31(3):dsae013 |
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Mohanty JK, Thakro V, Yadav A, Nayyar H, Dixit GP, Agarwal P, Parida SK, Jha UC (2024) Delineation of genes for a major QTL governing heat stress tolerance in chickpea. Plant Molecular Biology 114:19. |
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Mohanty JK, Jha UC, Dixit GP, Bharadwaj C, Parida SK (2023) eQTL-seq: a rapid genome-wide integrative genetical genomics strategy to dissect complex regulatory architecture of gene expression underlying quantitative trait variation in crop plants. Plant Molecular Biology Reporter 42 (2), 218-223. |
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Francis A, Singh NP, Singh M, Sharma P, Gayacharan, Kumar D, Basu U, Bajaj D, Varshney N, Joshi DC, Semwal DP, Tyagi V, Wankhede D, Bharadwaj R, Singh AK, Parida SK, Chattopadhyay D. (2023) The ricebean genome provides insight into Vigna genome evolution and facilitates genetic enhancement. Plant Biotechnology Journal 21:1522-1524. |
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Basu U and Parida SK (2023) The developmental dynamics in cool season legumes with focus on chickpea. Plant Molecular Biology 111:473-491. |
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Thakro V, Malik N, Basu U, Srivastava R, Narnoliya L, Daware A, Varshney N, Mohanty JK, Bajaj D, Dwivedi V, Tripathi S, Jha UC, Dixit GP, Singh AK, Tyagi AK, Upadhyaya HD, Parida SK (2023) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology 191:1884-1912. |
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Basu U, Hegde VS, Daware A and Parida SK (2022) Transcriptome landscape of early inflorescence developmental stages identifies key flowering time regulators in chickpea. Plant Molecular Biology 108:565-583. |
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Jha UC, Chaturvedi SK, Singh NP, Srivastava A, Mondal B, Kumar Y, Tripathi S, Paul PJ, Nayyar H, Thakro V, Jha R and Parida SK (2022) Elucidating genetic diversity and association mapping to identify SSR markers linked to 100 seed weight in chickpea (Cicer arietinum L.). Indian Journal of Genetics and Plant Breeding 82:193-199. |
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Mohanty JK, Jha UC, Dixit GP, Parida SK (2022) Harnessing the hidden allelic diversity of wild Cicer to accelerate genomics-assisted chickpea crop improvement. Molecular Biology Reporter 49:5697-5715. |
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Daware A, Malik A, Srivastava R, Das D, Ellur RK, Singh AK, Tyagi AK, Parida SK (2022) Rice Pan-genome Array (RPGA): an efficient genotyping solution for pan-genome-based accelerated crop improvement in rice. The Plant Journal 113:26-46. |
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Basu U, Sharma A, Bajaj D, Malik N, Jha UC, Upadhyaya HD, Parida SK (2021) The DNA replication, repair, and recombination pathway genes modulating yield and stress tolerance traits in chickpea. Plant Molecular Biology Reporter 4: 119-135. |
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Basu U and Parida SK (2021) Restructuring plant types for developing tailor-made crops. Plant Biotechnology Journal 21:1106-1122. |
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Basu U, Sharma A, Bajaj D, Malik N, Jha UC, Upadhyaya HD and Parida SK (2021) The DNA Replication, Repair, and Recombination Pathway Genes Modulating Yield and Stress Tolerance Traits in Chickpea. Plant Molecular Biology Reporter 40:119-135. |
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Narnoliya L, Basu U, Bajaj D, Malik N, Thakro V, Daware A, Sharma A, Tripathi S, Hegde VS, Upadhyaya HD, Singh AK, Tyagi AK, Parida SK (2019) Transcriptional signatures modulating shoot apical meristem morphometric and plant architectural traits enhance yield and productivity in chickpea. Plant Journal 98:864-883. |
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Basu U, Upadhyaya HD, Srivastava R, Daware A, Malik N, Sharma A, Bajaj D, Narnoliya L, Thakro V, Kujur A, Tripathi S, Bharadwaj C, Hegde VS, Pandey AK, Singh AK, Tyagi AK, Parida SK (2019) ABC transporter-mediated transport of glutathione conjugates enhances seed yield and quality in chickpea. Plant Physiology 180:253-275. |
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Basu U, Narnoliya L, Srivastava R, Sharma A, Bajaj D, Daware A, Thakro V, Malik N, Upadhyaya HD, Tripathi S, Hegde VS, Tyagi AK, Parida SK (2019) CLAVATA signaling pathway genes modulating flowering time and flower number in chickpea. Theoretical and Applied Genetics 132:2017-2038. |
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Basu U, Bajaj D, Sharma A, Malik N, Daware A, Narnoliya L, Thakro V, Upadhyaya HD, Kumar R, Tripathi S, Bharadwaj C, Tyagi AK, Parida SK (2019) Genetic dissection of photosynthetic efficiency traits for enhancing seed yield in chickpea. Plant, Cell & Environment 42:158-173. |
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Sharma A, Basu U, Malik N, Daware A, Thakro V, Narnoliya L, Bajaj D, Tripathi S, Hegde VS, Upadhyaya HD, Singh AK, Tyagi AK, Parida SK (2019) Genome-wide cis-regulatory signatures for modulation of agronomic traits as exemplified by drought yield index (DYI) in chickpea. Functional Integrative Genomics DOI:10.1007/s10142-019-00691-2. |
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Basu U, Srivastava R, Bajaj D, Thakro V, Daware A, Malik N, Upadhyaya HD, Parida SK (2018) Genome-wide generation and genotyping of informative SNPs to scan molecular signatures for seed yield in chickpea. Scientific Reports 8:13240. |
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Dwivedi V, Parida SK, Chattopadhyay D (2017) A repeat length variation in myo-inositol monophosphate gene contributes to seed size trait in chickpea. Scientific Reports 7:4764. |
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Srivastava R, Upadhyaya HD, Kumar R, Daware A, Basu U, Shimray PW, Tripathi S,Bharadwaj C, Tyagi AK, Parida SK (2017) A Multiple QTL-Seq strategy delineates potential genomic loci governing flowering time in chickpea. Frontiers in Plant Science 8:1105. |
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Daware AV, Srivastava R, Singh AK, Parida SK, Tyagi AK (2017) Regional association analysis of metaQTLs delineates candidate grain size genes in rice. Frontiers in Plant Science 8:807. |
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Upadhyaya HD, Bajaj D, Tripathi S, Bharadwaj C, Tyagi AK, Parida SK (2017) Genetic dissection of plant growth habit in chickpea. Functional & Integrative Genomics 17:711-723. |
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Parida SK, Srivastava R, Bajaj D (2017) A genome-wide mQTL-seq scan identifies potential molecular signatures regulating plant height in chickpea. Plant Molecular Biology Reporter 35:273-286. |
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Shimray PW, Bajaj D, Srivastava R, Daware A, Upadhyaya HD, Kumar R, Bharadwaj C, Tyagi AK, Parida SK (2017) Identifying transcription factor genes associated with yield traits in chickpea. Plant Molecular Biology Reporter 35:562-574 |
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Kujur A, Upadhyaya HD, Bajaj D, Gowda CL, Sharma S, Tyagi AK, Parida SK (2016) Identification of candidate genes and natural allelic variants for QTLs governing plant height in chickpea. Scientific Reports 6:27968. |
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Srivastava R, Bajaj D, Malik A, Singh M, Parida SK (2016) Transcriptome landscape of perennial wild Cicer microphyllum uncovers functionally relevant molecular tags regulating agronomic traits in chickpea. Scientific Reports 6:33616. |
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Upadhyaya HD, Bajaj D, Das S, Kumar V, Gowda CLL, Sharma S, Tyagi AK, Parida SK (2016) Genetic dissection of seed-iron and zinc concentrations in chickpea. Scientific Reports 6:24050. |
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Badoni S, Das S, Sayal SYK, Gopalakrishnan S, Singh AK, Rao AR, Agarwal P, Parida SK, Tyagi AK (2016) Genome-wide generation and use of informative intron-spanning and intron-length polymorphism markers for high-throughput genetic analysis in rice. Scientific Reports 6:23765. |
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Das S, Singh M, Srivastava R, Bajaj D, Saxena MS, Rana JC, Bansal KC, Tyagi AK, Parida SK (2016) mQTL-seq delineates functionally relevant candidate gene harbouring a major QTL regulating pod number in chickpea. DNA Research 23:53-65. |
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Daware A, Das S, Srivastava R, Badoni S, Singh AK, Agarwal P, Parida SK, Tyagi AK (2016) An efficient strategy combining SSR markers-and advanced QTL-seq-driven QTL mapping unravels candidate genes regulating grain weight in rice. Frontiers in Plant Science 7: 1535. |
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Srivastava R, Singh M, Bajaj D, Parida SK (2016) A high-resolution InDel (Insertion-Deletion) markers-anchored consensus genetic map identifies major QTLs governing pod number and seed yield in chickpea. Frontiers in Plant Science 7:1362. |
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Upadhyaya HD, Bajaj D, Narnoliya L, Das S, Kumar V, Gowda CLL, Sharma S, Tyagi AK, Parida SK (2016) Genome-Wide Scans for Delineation of Candidate Genes Regulating Seed-Protein Content in Chickpea. Frontier in Plant Science 7:302. |
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Bajaj D, Srivastava R, Tripathi S, Bharadwaj C, Upadhyaya HD, Tyagi AK, Parida SK (2016) EcoTILLING-based association mapping efficiently delineates functionally relevant natural allelic variants of candidate genes governing agronomic traits in chickpea. Frontiers in Plant Science 7:450. |
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Bajaj D, Upadhyaya HD, Das S, Kumar V, Gowda CL, Sharma S, Tyagi AK, Parida SK (2016) Identification of candidate genes for dissecting complex branch number trait in chickpea. Plant Science 245:61-70. |
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Srivastava R, Bajaj D, Sayal YK, Meher PK, Upadhyaya HD, Kumar R, Tripathi S, Bharadwaj C, Rao AR, Parida SK (2016) Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea. Plant Science 252:374-387. |
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Das S, Bajaj D, Krishnan SG, Singh AK, Parida SK (2016) Revisiting the decoded genomes to promptly reveal their genomic perspectives. Current Science 112:279-294. |
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Bajaj D, Saxena MS, Kujur A, Das S, Badoni S, Tripathi S, Upadhyaya HD, Gowda CLL, Sharma S, Singh S, Tyagi AK, Parida SK (2015) Genome-wide conserved non-coding microsatellite (CNMS) marker-based integrative genetical genomics for quantitative dissection of seed weight in chickpea. Journal of Experimental Botany 66:1271-1290 |
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Das S, Upadhyaya HD, Srivastava R, Bajaj D, Gowda CLL, Sharma S, Singh S, Tyagi AK, Parida SK (2015) Genome-wide insertion-deletion (InDel) marker discovery and genotyping for genomics-assisted breeding applications in chickpea. DNA Research 22:377-386. |
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Das S, Upadhyaya HD, Bajaj D, Kujur A, Badoni S, Laxmi, Kumar V, Tripathi S, Gowda CLL, Sharma S, Singh S, Tyagi AK, Parida SK (2015) Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea. DNA Research22:193-203. |
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Bajaj D, Upadhyaya H, Khan Y, Das S, Badoni S, Shree T, Kumar V, Tripathi S, Gowda CLL, Singh S, Sharma S, Tyagi AK, Chattopadhyay D, Parida SK (2015) A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea. Scientific Reports 5:9264. |
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Kujur A, Upadhyaya HD, Shree T, Bajaj D, Das S, Saxena M, Badoni S, Kumar V, Tripathi S, Gowda CLL, Sharma S, Singh S, Tyagi AK, Parida SK (2015) Ultra-high density intra-specific genetic linkage maps accelerate identification of functionally relevant molecular tags governing important agronomic traits in chickpea. Scientific Reports 5:9468. |
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Kujur A, Bajaj D, Upadhyaya HD, Das S, Ranjan R, Shree T, Saxena MS, Badoni S, Kumar V, Tripathi S, Gowda CLL, Sharma S, Singh S, Tyagi AK, Parida SK (2015) A genome-wide SNP scan accelerates trait-regulatory genomic loci identification in chickpea. Scientific Reports 5:11166. |
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Bajaj D, Das S, Badoni S, Kumar V, Singh M, Bansal KC, Tyagi AK, Parida SK (2015) Genome-wide high-throughput SNP discovery and genotyping for understanding natural (functional) allelic diversity and domestication patterns in wild chickpea. Scientific Reports 5:11627. |
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Bajaj D, Das S, Upadhyaya HD, Ranjan R, Badoni S, Kumar V, Tripathi S, Gowda CLL, Sharma S, Singh S, Tyagi AK, Parida SK (2015) A genome-wide combinatorial strategy dissects complex genetic architecture of seed coat color in chickpea. Frontiers in Plant Science 6:979. |
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Kujur A, Bajaj D, Saxena MS, Upadhyaya HD, Das S, Ranjan R, Shree T, Saxena MS, Badoni S, Kumar V, Tripathi S, Gowda CLL, Sharma S, Singh S, Tyagi AK, Jain M, Parida SK (2015) Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea. Frontiers in Plant Science 6:162. |
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Upadhyaya HD, Bajaj D, Das S, Saxena MS, Badoni S, Kumar V, Tripathi S, Sharma S, Tyagi AK, Parida SK (2015) A genome-scale integrated approach aids in genetic dissection of complex flowering time trait in chickpea. Plant Molecular Biology 89:403-420. |
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Bajaj D, Das S, Parida SK (2015) CNMS: The preferred genic markers for comparative genomic, molecular phylogenetic, functional genetic diversity and differential gene regulatory expression analyses in chickpea. Journal of Biosciences40:579-592 |
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Saxena MS, Bajaj D, Das S, Kujur A, Kumar V, Singh M, Bansal KC, Tyagi AK, Parida SK (2014) An integrated genomic approach for rapid delineation of candidate genes regulating agro-morphological traits in chickpea. DNA Research 21:695-710. |
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Saxena MS, Bajaj D, Kujur A, Das S, Badoni S, Kumar V, Singh M, Bansal KC, Tyagi AK, Parida SK (2014) Natural allelic diversity, genetic structure and linkage disequilibrium pattern in wild chickpea. PLOS ONE 9:e107484. |
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Kujur A, Bajaj D, Saxena MS, Tripathi S, Upadhyaya HD, Gowda CLL, Singh S, Tyagi AK, Jain M, Parida SK (2014) An efficient and cost-effective approach for genic microsatellite marker-based large-scale trait association mapping: identification of candidate genes for seed weight in chickpea. Molecular Breeding32:241-265. |
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Kujur A, Bajaj D, Saxena MS, Tripathi S, Upadhyaya HD, Gowda CLL, Singh S, Jain M, Tyagi AK, Parida SK (2013) Functionally relevant microsatellite markers from chickpea transcription factor genes for efficient genotyping applications and trait association mapping. DNA Research 20:355-374. |
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| First Author |
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Agarwal P, Parida SK, Raghuvanshi S, Kapoor S, Khurana P, Khurana JP, Tyagi AK (2016) Rice improvement through genome-based functional analysis and molecular breeding in India. Rice 9:1 (As Joint First Author) |
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Parida SK, Kalia S, Pandit A, Nayak P, Singh RK, Gaikwad K, Srivastava PS, Singh NK, Mohapatra T (2016) Single nucleotide polymorphism in sugar pathway and disease resistance genes in sugarcane. Plant Cell Reports 35:1629-1653. |
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Parida SK, Verma M, Yadav SK, Ambawat S, Das S, Garg R, Jain M (2015) Development of genome-wide informative simple sequence repeat markers for large-scale genotyping applications in chickpea and development of web resource. Frontiers in Plant Science 6:645. |
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Parida SK, Mukerji M, Singh AK, Singh NK, Mohapatra T (2012) SNPs in stress responsive rice genes: validation and genotyping using Illumina GoldenGate assay. BMC Genomics 13:426. |
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Parida SK, Pandit A, Gaikwad K, Sharma TR, Srivastava PS, Singh NK, Mohapatra T (2010). Functionally relevant microsatellites in sugarcane unigenes. BMC Plant Biology 10:251. |
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Ngangkham Umakanta, Parida SK, Dey SK, Raj Kumar KA, Singh AK, Singh NK, Mohapatra T (2010). Genic markers for WA cytoplasm based male sterility and its fertility restoration in rice. Molecular Breeding 26:275-292 (As Joint First Author). |
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Parida SK, Yadava DK, Mohapatra T (2010). Microsatellites in Brassica unigenes: Relative abundance, marker design and use in comparative physical mapping and genome analysis. Genome53:55-67. |
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Parida SK, Dalal V, Singh NK, Mohapatra T (2009) Genic non-coding microsatellites in the rice genome: characterization, marker design and use in assessing genetic and evolutionary relationships among domesticated groups. BMC Genomics10:140. |
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Parida SK, Kalia SK, Kaul S, Dalal V, Hemaprabha G, Selvi A, Pandit A, Singh A, Gaikwad K, Sharma TR, Srivastava PS, Singh NK, Mohapatra T (2009) Informative genomic microsatellite markers for efficient genotyping applications in sugarcane. Theoretical and Applied Genetics118:327-338. |
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Parida SK, Raj Kumar KA, Dalal V, Singh NK, Mohapatra T (2006) Unigene derived microsatellite markers for the cereal genomes. Theoretical and Applied Genetics 112:808-817. |
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| Co-authors |
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Chakraborty A, Singh B, Pandey V, Parida SK, Bhatia S (2024) MicroRNA164e suppresses NAC100 transcription factor-mediated synthesis of seed storage proteins in chickpea. New Phytologist 242:2652-2668. |
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Sahu TK, Verma SK, Gayacharan, Singh NP, Joshi DC, Wankhede DP, Singh M, Bhardwaj R, Singh B, Parida SK, Chattopadhyay D, Singh GP, Singh AK (2024) Transcriptome-wide association mapping provides insights into the genetic basis and candidate genes governing flowering, maturity and seed weight in rice bean (Vigna umbellata). BMC Plant Biology 24:379. |
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Prusty A, Mehra P, Sharma S, Malik N, Agarwal P, Parida SK, Kapoor S, Tyagi AK (2024) OsMED14_2, a tail module subunit of Mediator complex, controls rice development and involves jasmonic acid. Plant Science 346:112146. |
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Awasthi R, Devi P, Jha UC, Sharma KD, Roorkiwal M, Kumar S, Pareek A, Siddique K.H.M., Vara Prasad PV, Parida SK, Nayyar H (2024) Exploring the synergistic effects of drought and heat stress on chickpea seed development: Insights into nutritional quality and seed yield. Plant Stress 14:100635. |
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Harish D, Reddy SP, Kumar N, Bharadwaj C, Kumar T, Parida SK, Patil BS, Sudhir K, Jain PK, Kumar Y, Varshney RK (2024) Integrating multilocus genome-wide association studies in chickpea landraces to discern the genetics of drought tolerance. Frontiers in Sustainable Food Systems DOI:10.3389/fsufs.2024.1389970. |
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Patil NS, Hegde V, Vinod, KK, Parida SK, Jain PK (2024) Genome-wide association studies for flowering time, shelling percentage, harvest index and related traits in chickpea (Cicer arietinum L.). Euphytica 220:144. |
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Gupta SK, Dwivedi V, Kute NS, Francis P, Parida SK, Chattopadhyay D (2024) Identification of a stable drought-tolerant high-yielding line for chickpea crop improvement. Plant Molecular Biology Reporter DOI:10.1007/s11105-024-01471-4. |
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Chandel SS, Gaikwad DS, Rathour R, Dohru VK, Sirari A, Jha U, Parida SK, Sharma KD (2024) Differential expression of antimicrobial metabolites, phenylpropanoid and phytohormone metabolic pathway genes determines resistance or susceptibility to Ascochyta rabiei in chickpea. Plant Pathology 73:1247-1263. |
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Kumar T, Bharadwaj C, Jain PK, Nimmy MS, Joshi N, Parida SK, Bindra S, Kole C, Varshney RK. Unraveling the genetics of heat tolerance in chickpea landraces (Cicer arietinum L.) using genome-wide association studies. Frontiers in Plant Science 15:1376381. |
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Banerjee G, Singh D, Pandey C, Jonwal S, Basu U, Parida SK, Pandey A, Sinha AK (2023) Rice Mitogen-Activated Protein Kinase regulates serotonin accumulation and interacts with cell cycle regulators under prolonged UV-B exposure. Plant Physiology Biochemistry 203:108078.
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Jha UC, Nayyar H, Roychowdhury R, Vara Prasad P.V., Parida SK, Siddique K.H.M. (2023) Non-coding RNAs (ncRNAs) in plant: Master regulators for adapting to extreme temperature conditions. Plant Physiology Biochemistry 205:108164.
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Dwivedi V, Pal L, Singh S, Singh NP, Parida SK, Chattopadhyay D (2023) The chickpea WIP2 gene underlying a major QTL contributes to lateral root development. Journal of Experimental Botany erad171; https://doi.org/10.1093/jxb/erad171.
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Mahto A, Yadav A, Awasthi PV, Parida SK, Tyagi AK, Agarwal P (2023) Cytological, transcriptome and miRNome temporal landscapes decode enhancement of rice grain size. BMC Biology 21:91 https://doi.org/10.1186/s12915-023-01577-3.
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Sharma P, Goudar G, Chandragiri AK, Ananthan R, Subhash K, Chauhan A, Longvah T, Singh M, Bhardwaj R, Parida SK, Singh AK, Gayacharan, Chattopadhyay D (2023) Assessment of diversity in anti-nutrient profile, resistant starch, minerals and carbohydrate components in different ricebean (Vigna umbellata) accessions. Food Chemistry 405(A):134835 https://doi.org/10.1016/j.foodchem.2022.134835.
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Chakraborty A, Junaid A, Parida SK, Bhatia S (2023) Integrated genomic approaches delineate a novel role of ROP1 ENHANCER1 in controlling seed protein content of chickpea. Journal of Experimental Botany 74:817-834.
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Gayacharan, Parida SK, Mondal N, Yadav R, Vishwakarma H, Rana JC (2023) Mining legume germplasm for genetic gains: An Indian perspective. Frontiers in Genetics 14:996828. |
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Jha UC, Nayyar H, Parida SK, Beena R, Pang J, Siddique KHM (2023) Breeding and genomics approaches for improving phosphorus-use efficiency in grain legumes. Environment and Experimental Botany 205:105120.
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Verma SK, Mittal S, Gayacharan, Wankhede DP, Parida SK, Chattopadhyay D, Prasad G, Mishra DC, Joshi DC, Singh M, Singh K, Singh AK (2022) Transcriptome Analysis Reveals Key Pathways and Candidate Genes Controlling Seed Development and Size in Ricebean (Vigna umbellata). Frontiers in Genetics 12:791355.
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Jha UC, Sharma KD, Nayyar H, Parida SK, Siddique KHM (2022) Breeding and Genomics Interventions for Developing Ascochyta Blight Resistant Grain Legumes. International Journal of Molecular Sciences 23:2217.
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Devi P, Jha UC, Prakash V, Kumar S, Parida SK, Paul PJ, Prasad PVV, Sharma KD, Siddique KHM and Nayyar H (2022) Response of physiological, reproductive function and yield traits in cultivated chickpea (Cicer arietinum L.) under heat stress. Frontiers in Plant Science 13:880519.
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Jha UC, Nayyar H, Parida SK, Deshmukh R, von Wettberg EJB, Siddique KHM (2022) Ensuring global food security by improving protein content in major grain legumes using breeding and 'Omics' tools. International Journal of Molecular Sciences 23:7710.
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Jha UC, Nayyar H, Parida SK, M Bakir, Wettberg EV, Siddique KHM (2022) Progress of genomics-driven approaches for sustaining underutilized legume crops in the post-genomic era. Frontiers in Genetics. https://doi.org/10.3389/fgene.2022.831656.
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Mehra P, Pandey BK, Verma L, Prusty A, Singh AP, Sharma S, Malik N, Bennet MJ, Parida SK, Giri, J, Tyagi AK (2022) OsJAZ11 regulates spikelet and seed development in rice. Plant Direct 6: e401.
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Pandey S, Singh A, Parida SK, Prasad M (2022) Combining speed breeding with traditional and genomics-assisted breeding for crop improvement. Plant Breeding 141:301-313. https://doi.org/10.1111/pbr.13012.
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Shimray PW, Bharadwaj C, Patil BS, Sankar SM, Kumar N, Reddy SPP, Singhal T, Hegde V, Parida SK, Roorkiwal M, Varshney RK, Verma P (2022) Evaluation and Identification of Stable Chickpea Lines for Yield-Contributing Traits from an Association Mapping Panel. Agronomy 12:3115.
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Giri J, Parida SK, Raghuvanshi S, Tyagi AK (2021) Emerging molecular strategies for improving rice drought tolerance. Current Genomics 22:16-25.
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Jha UC, Jha R, Bohra A, Manjunatha L, Saabale PR, Parida SK, Chaturvedi SK, Thakro V and Singh NP (2021) Association mapping of genomic loci linked with Fusarium wilt resistance (Foc2) in chickpea. Plant Genetic Resources 19:195-202
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Jha UC, Jha R, Thakro V, Kumar A, Gupta S, Nayyar H, Basu P, Parida SK, Singh NP (2021) Discerning molecular diversity and association mapping for phenological, physiological and yield traits under high temperature stress in chickpea (Cicer arietinum L.). Journal of Genetics 100:1-15.
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Dharajiya DT, Shah A, Galvadiya BP, Patel MP, Srivastava R, Pagi NK, Solanki SD, Parida SK, Tiwari KK (2020) Genome-wide microsatellite markers in castor (Ricinus communis L.): Identification, development, characterization, and transferability in Euphorbiaceae. Industrial Crops and Products 151:112461.
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Kumar A, Daware A, Kumar A, Kumar V, Gopala Krishnan S, Mondal S, Patra BC, Singh AK, Tyagi AK, Parida SK, Thakur JK (2020) Genome-wide analysis of polymorphisms identified domestication-associated long low-diversity region carrying important rice grain size/weight quantitative trait loci. Plant Journal 103:1525-1547.
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Malik N, Ranjan R, Parida SK, Agarwal P, Tyagi AK (2020) Mediator subunit OsMED14_1 plays an important role in rice development. Plant Journal 101:1411-1429.
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Jha UC, Bohra A, Pandey S, Parida SK (2020) Breeding, genetics, and genomics approaches for improving Fusarium wilt resistance in major grain legumes. Frontiers in Genetics 11:1001.
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Mathew IE, Priyadarshini R, Mahto A, Jaiswal P, Parida SK, Agarwal P (2020) SUPER STARCHY1/ONAC025 participates in rice grain filling. Plant Direct 4:e00249.
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Singh RK, Prasad A, Muthamilarasan M, Parida SK, Prasad M (2020) Breeding and biotechnological interventions for trait improvement: status and prospects. Planta 252:1-18.
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Kohli PS, Verma PK, Verma R, Parida SK, Thakur JK, Giri J (2020) Genome-wide association study for phosphate deficiency responsive root hair elongation in chickpea. Functional & Integrative Genomics 20:775-786.
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Dwivedi N, Maji S, Waseem M, Thakur P, Kumar V, Parida SK, Thakur JK (2019) The Mediator subunit OsMED15a is a transcriptional co-regulator of seed size/weight-modulating genes in rice. Biochimica et Biophysica Acta - Gene Regulatory Mechanisms 1862:194432.
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Das S, Parida SK, Agarwal P, Tyagi AK (2019) Transcription factor OsNF-YB9 regulates reproductive growth and development in rice. Planta 250:1849-1865.
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Pandey S, Kumari A, Shree M, Kumar V, Singh P, Bharadwaj C, Loake GJ, Parida SK, Masakapalli SK, Gupta KJ (2019) Nitric oxide accelerates germination via the mregulation of respiration in chickpea. Journal of Experimental Botany DOI:10.1093/jxb/erz185. |
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Jha UC, Bohra A, Jha R, Parida SK (2019) Salinity stress response and 'omics' approaches for improving salinity stress tolerance in major grain legumes. Plant Cell Reports 38:255-277. |
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Ngangkham U, Parida SK, Singh AK, Mohapatra T (2019) Differential RNA editing of mitochondrial genes in WA-Cytoplasmic based male sterile line Pusa6A, its maintainer and restorer lines of rice hybrids. Rice Science 4:26. |
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Jha UC, Bohra A, Nayyar H, Rani A, Devi P, Saabale PR, Parida SK (2019) Breeding and Genomics Approaches for Improving Productivity Gains in Chickpea Under Changing Climate. In: Kole C. (eds) Genomic Designing of Climate-Smart Pulse Crops. Springer, Cham, pp-135-164. |
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Kumar K, Purayannur S, Kaladhar VC, Parida SK and Verma PK (2018) mQTL-seq and classical mapping implicates the role of an AT-HOOK MOTIF CONTAINING NUCLEAR LOCALIZED (AHL) family gene in Ascochyta blight resistance of chickpea. Plant Cell & Environment 41:2128-2140. |
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Jha UC, Jha R, Bohra A, Parida SK, Kole PC, Thakro V, Singh D and Singh NP (2018) Population structure and association analysis of heat stress relevant traits in chickpea (Cicer arietinum L.). 3 Biotech 8:43. |
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Ranjan R, Khurana R, Malik N, Badoni S, Parida SK, Kapoor S, Tyagi AK (2017) bHLH142 regulates various metabolic pathway-related genes to affect pollen development and anther dehiscence in rice. Scientific Reports 7:43397. |
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Malik N, Dwivedi N, Singh AK, Parida SK, Agarwal P, Thakur JK, Tyagi AK (2016) An integrated genomic strategy delineates candidate mediator genes regulating grain size and weight in rice. Scientific Reports 6:23253. |
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Bhadouria J, Singh AP, Mehra P, Verma L, Srivastawa R, Parida SK, Giri J (2017) Identification of purple acid phosphatases in chickpea and potential roles of CaPAP7 in seed phytate accumulation. Scientific Reports 7:11012. |
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Jha UC, Bohra A, Parida SK, Jha R (2017) Integrated “omics” approaches to sustain global productivity of major grain legumes under heat stress. Plant Breeding 136:437-459 |
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Gupta S, Nawaz K, Parween S, Roy R, Sahu K, Pole AK, Khandal H, Srivastava R, Parida SK, Chattopadhyay D (2016) Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement. DNA Research 24:1-10. |
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Kumar V, Singh A, Amitha Mithra SV, Krishnamurthy SL, Parida SK, Jain S, Tiwari KK, Kumar P, Rao AR, Sharma SK, Khurana JP, Singh NK, Mohapatra T (2015) Genome-wide association mapping of salinity tolerance in rice (Oryza sativa). DNA Research 22:133-145. |
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Parween S, Nawaz K, Roy R, Pole AK, Venkata Suresh B, Misra G, Jain M, Yadav G, Parida SK, Tyagi AK, Bhatia S, Chattopadhyay D (2015) An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.). Scientific Reports 5:12806. |
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Singh AP, Pandey BK, Deveshwar P, Narnoliya L, Parida SK, Giri J (2015) JAZ repressors: potential involvement in nutrients deficiency response in rice and chickpea. Frontier in Plant Science 6:975. |
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Khajuria YP, Saxena MS, Gaur R, Chattopadhyay D, Jain M, Parida SK, Bhatia S (2015) Development and integration of genome-wide polymorphic microsatellite markers onto a reference linkage map for constructing a high-density genetic map of chickpea. PLOS ONE10:e0125583. |
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Agarwal P, Parida SK, Mahto A, Das S, Mathew IE, Malik N, Tyagi AK (2014) Expanding frontiers in plant transcriptomics in aid of functional genomics and molecular breeding. Biotechnology Journal 9:1480-1492. |
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Mishra AK, Muthamilarasan M, Khan Y, Parida SK, Prasad M (2014) Genome-wide investigation and expression analyses of WD40 protein family in the model plant foxtail millet (Setaria italica L.). PLOS ONE 9:e86852. |
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Gupta S, Kumari K, Muthamilarasan M, Parida SK, Prasad M (2014) Population structure and association mapping of yield contributing agronomic traits in foxtail millet. Plant Cell Reports33:881-893. |
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Tiwari KK, Singh A, Pattnaik S, Sandhu M, Kaur S, Jain S, Tiwari S, Mehrotra S, Anumalla M, Samal R, Bhardwaj J, Dubey N, Sahu V, Kharshing GA, Zeliang PK, Sreenivasan K, Kumar P, Parida SK, Mithra SVA, Rai V, Tyagi W, Agarwal PK, Rao AK, Pattanayak A, Chandel G, Singh AK, Bisht IS, Bhat KV, Rao GJN, Khurana JP, Singh NK, Mohapatra T (2014) Identification of a diverse mini-core panel of Indian rice germplasm based on genotyping using microsatellite markers. Plant Breeding 134:164-171. |
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Muthamilarasan M, Parida SK, Prasad M (2014) Advances in wheat genomics and its potential in ensuring food security in the scenario of climate change. Proceedings of the Indian National Science Academy80:325-331. |
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Pandey G, Misra G, Kumari K, Gupta S, Parida SK, Chattopadhyay D, Prasad M (2013) Genome-wide development and use of microsatellite markers for large-scale genotyping applications in foxtail millet [Setaria italica (L.)]. DNA Research 20:197-207. |
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Muthamilarasan M, Venkata SB, Pandey G, Kumari K, Parida SK, Prasad M (2014) Development of 5123 Intron length polymorphic (ILP) markers for large-scale genotyping applications in foxtail millet. DNA Research 21:41-52. |
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Puranik S, Sahu PP, Mandal SN, Parida SK, Prasad M (2014) Comprehensive genome-wide survey, genomic constitution and expression profiling of the NAC transcription factor family in foxtail millet [Setaria italica (L.)]. PLOS ONE 8:e64594. |
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Kumari K, Muthamilarasan M, Misra G, Gupta S, Subramanian A, Parida SK, Chattopadhyay D, Prasad M (2014) Development of eSSR-markers in Setaria italica and their applicability in studying genetic diversity, cross-transferability and comparative mapping in millet and non-millet species. PLOS ONE 8:e67742. |
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Thakur JK, Agarwal P, Parida SK, Bajaj D, Pasrija R (2014) Sequence and expression analyses of KIX domain proteins suggest their importance in seed development and determination of seed size in rice, and genome stability in Arabidopsis. Molecular Genetics and Genomics 288:329-346. |
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Das B, Sengupta S, Parida SK, Roy B, Ghosh M, Prasad M, Ghose TK (2014) Genetic diversity and population structure of rice landraces from Eastern and North Eastern States of India. BMC Genetics 14:71. |
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Dixit N, Dokku P, Amitha Mithra SV, Parida SK, Singh AK, Singh NK, Mohapatra T (2014) Haplotype structure in grain weight gene GW2 and its association with grain characteristics in rice. Euphytica 192:55-61. |
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Das A, Parida SK (2014) Advances in biotechnological applications in three important food legumes. Plant Biotechnology Reports 8:83-99. |
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Jhanwar S, Priya P, Garg R, Parida SK, Tyagi AK, Jain M (2012) Transcriptome sequencing of wild chickpea as a rich resource for marker development. Plant Biotechnology Journal 10:690-702. |
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Agarwal G, Jhanwar S, Priya P, Singh VK, Saxena MS, Parida SK, Garg R, Tyagi AK, Jain M (2012) Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers. PLOS ONE 7:e52443. |
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Bharathi LK, Parida SK, Munshi AD, Behera TK, Raman KV, Mohapatra T (2011) Molecular diversity and phylogeny of Momordica spp. of Indian occurrence. Genetic Resources and Crop Evolution 59:937-948. |
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Naik PK, Alam MA, Singh H, Goyal V, Parida SK, Kalia S, Mohapatra T (2010) Assessment of genetic diversity through RAPD, ISSR and AFLP markers in Podophyllum hexandrum: a medicinal herb from the Northwestern Himalayan region. Physiology and Molecular Biology of Plants 16:1-13. |
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Yadava, DK, Parida SK, Dwivedi VK, Varshney A, Ghazi IA, Sujata V, Mohapatra T (2009). Cross-transferability and polymorphic potential of genomic STMS markers of Brassica species. Journal of Plant Biochemistry and Biotechnology 18:29-36. |
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Sonah H, Desmukh R, Parida SK, Kotasthane A (2009) Morphological and genetic variation among different isolates of Magnaporthe grisea collected from Chhattisgarh. Indian Phytopathology 62:469-477. |
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Koundal V, Parida SK, Yadava DK, Ali A, Koundal KR, Mohapatra T (2008). Evaluation of microsatellite markers for genome mapping in Indian mustard (Brassica juncea L.). Journal of Plant Biochemistry and Biotechnology 17:69-72. |
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Verma VK, Behera TK, Munshi AD, Parida SK, Mohapatra T (2007). Genetic diversity of ash gourd [(Benincasa hispida (Thunb.) Cogn.] inbred lines based on RAPD and ISSR markers and their hybrid performance. Scientia Horticulturae 113:231-237. |
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| Books |
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Gayacharan, Parida SK, Singh AK, Chattopadhyay D, Joshi DC, Katna G (2024) Rice Bean (Vigna umbellata (Thunb.) Ohwi & Ohashi) Potential Pulses: Genetic and Genomic Resources. CABI Publisher, pp. 100-115. DOI:10.1079/9781800624658.0006. |
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Basu U, Parida SK (2023) CLAVATA signaling pathway receptors modulate developmental traits and stress responses in crops. In: Upadhyay SK, Shumayla (eds), Plant Receptor-Like Kinases. Elsevier B.V., pp 371-392.https://doi.org/10.1016/B978-0-323-90594-7.00004-1.
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Jha UC, Nayyar H, Parida SK, Siddique KHM (2022) Horse gram, an underutilized climate-resilientlegume: Breeding and genomic approach for improving future genetic gain. Developing Climate Resilient Grain and Forage Legumes. 167-178.
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Daware A, Parida SK, Tyagi AK (2020) Integrated genomic strategies for cereal genetic enhancement: combining QTL and association mapping. Cereal Genomics 2072:15-25.
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Tripathi S, Singh RK, Parida SK, Chaturvedi SK, Gaur PM, Kumar S, Dikshit HK, Mishra GP, Singh A (2022) Biofortification of Chickpea. Biofortification of Staple Crops, Springer Singapore, pp 335-344 doi.org/10.1007/978-981-16-3280-8_13.
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Mohanty JK, Parida SK (2022) Small RNA-omics: Decoding the regulatory networks associated with horticultural traits. Omics in Horticultural Crops doi.org/10.1016/B978-0-323-89905-5.00001-X.
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Jha UC, Bohra A, Nayyar H, Rani A, Devi P, Saabale PR, Parida SK (2019) Breeding and Genomics Approaches for Improving Productivity Gains in Chickpea Under Changing Climate. In: Kole C. (eds) Genomic Designing of Climate-Smart Pulse Crops. Springer, Cham, pp-135-164.
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Jha UC, Barh D, Parida SK, Jha R, Singh NP (2016) Whole-genome resequencing: current status and future prospects in genomics-assisted crop improvement. Applied Molecular Biotechnology: The Next Generation of Genetic Engineering, CRC Press, Taylor & Francis Group, Inc, 209-234.
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Das S, Parida SK (2015) Synergistic plant genomics and molecular breeding approaches for ensuring food security. In Genomics, Proteomics and Metabolomics in Nutraceuticals and Functional Foods, Second Edition (eds Bagchi D, Swaroop A, Bagchi M), John Wiley & Sons, Ltd, Chichester, UK. DOI: 10.1002/9781118930458.ch14.
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Parida SK, Mohapatra T (2010) Whole genome sequencing. In: Kole C, Abbott AG (Eds) Principles and Practices of Plant Genomics, Vol 3, Advanced Genomics, Science Publishers, Inc, New Hampshire and Edenbridge Ltd, British Isles, pp 120-174.
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| Review Articles |
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Mohanty JK, Parida SK (2024) Stripping off the rice panicle: induced genetic variation awakens the sheathed spikelet for a better yield. Journal of Experimental Botany 75:5459-5462. |
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Jha UC, Nayyar H, Roychowdhury R, Prasad PVV, Parida SK, Siddique KHM (2024) Non-coding RNAs (ncRNAs) in plant: Master regulators for adapting to extreme temperature conditions. Plant Physiology Biochemistry 205:108164 |
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Basu U, Parida SK (2021) Restructuring plant types for developing tailor-made crops. Plant Biotechnology Journal 21:1106-1122.
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Basu U and Parida SK (2023) The developmental dynamics in cool season legumes with focus on chickpea. Plant Molecular Biology 111:473-491.
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Giri J, Parida SK, Raghuvanshi S and Tyagi AK (2021) Emerging molecular strategies for improving rice drought tolerance. Current Genomics 22:16-25.
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Pandey S, Singh A, Parida SK, Prasad M (2022) Combining speed breeding approaches with conventional and genomics-assisted breeding for crop improvement. Plant Breeding 141:301-313.
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Daware A, Parida SK, Tyagi AK (2020) Integrated genomic strategies for cereal genetic enhancement: combining QTL and association mapping. Cereal Genomics 2072:15-25.
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Jha UC, Bohra A, Pandey S, Parida SK (2020) Breeding, genetics, and genomics approaches for improving Fusarium wilt resistance in major grain legumes. Frontiers in Genetics 11:1001.
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Daware A, Parida SK, Tyagi AK (2019) Integrated Genomic Strategies for Cereal Genetic Enhancement: Combining QTL and Association Mapping. Methods Molecular Biology 2072:15-25.
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Jha UC, Bohra A, Jha R, Parida SK (2019) Salinity stress response and 'omics' approaches for improving salinity stress tolerance in major grain legumes. Plant Cell Reports 38:255-277.
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Jha UC, Sharma, KD, Nayyar H, Parida SK, Siddique KHM (2022) Breeding and Genomics Interventions for Developing Ascochyta Blight Resistant Grain Legumes. International Journal of Molecular Science 23:2217.
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Agarwal P, Parida SK, Raghuvanshi S, Kapoor S, Khurana P, Khurana JP, Tyagi AK (2016) Rice improvement through genome-based functional analysis and molecular breeding in India. Rice 9:1.
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Agarwal P, Parida SK, Mahto A, Das S, Mathew IE, Malik N, Tyagi AK (2014) Expanding frontiers in plant transcriptomics in aid of functional genomics and molecular breeding. Biotechnology Journal 9:1480-1492.
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Kujur A, Saxena MS, Bajaj D, Laxmi, Parida SK (2013) Integrated genomics and molecular breeding approaches for dissecting the complex quantitative traits in crop plants. Journal of Biosciences 38:971-987.
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Das A, Parida SK (2013) Advances in biotechnological applications in three important food legumes. Plant Biotechnology Reports 8:83-99.
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| Web-Resources, Database & Tools |
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| Technologies and Products |
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Development of the First-ever 90K Pan-genome SNP Genotyping Arrays, "Indian Rice panArray (IndRA)" and "Indian Chickpea panArray (IndiCA)" for accelerated genomics-assisted crop improvement of rice and chickpea.
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Next-generation Molecular Breeding Develops Superior High-Yielding Chickpea Variety
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Annually, huge amount of yield loss is incurred due to occurrence of water stress at maturity in chickpea. Marker-assisted backcross breeding-derived drought tolerant desi chickpea variety "ADVIKA (NC7)" developed by introgressing superior natural alleles of an ABC transporter gene in the genetic background of JG 16 enhances seed weight and yield (7% high) under drought stress. This is the First high-yielding drought tolerant variety developed by DBT-NIPGR is now approved by the Central Sub-committee on Crop Standards, Notification and Release of Varieties (CVRC), Ministry of Agriculture & Farmers Welfare, Government of India, for Release and Notification as a Central Variety for National use and Cultivation especially in Central Zone of India.
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Development of High-yielding Protein-rich Desi and Kabuli Varieties in Chickpea [ICAR-All India Coordinated Research Projects (AICRP) on Chickpea-Advanced Varietal Trial].
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Development of A Semi-erect/Semi-dwarf Chickpea Variety with Enhanced Planting Density and Productivity [ICAR- AICRP on Chickpea-Advanced Varietal Trial].
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Development of an Early-Flowering/Maturing Chickpea Variety with Increased Flower number and Enhanced Yield [ICAR- AICRP Trials on Chickpea-Advanced Varietal Trial].
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| Patents |
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Thakro V, Malik N, Parida SK (2021) DEVELOPMENT OF HIGH-YIELDING DROUGHT-TOLERANT PLANT LINES AND METHODS THERE OF [INDIAN PATENT APPLICATION No. 202111028267].
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Daware A, Parida SK (2021) PAN-GENOME GENOTYPING ARRAY AND USES THEREOF [INTERNATIONAL PATENT COOPERATION TREATY (PCT)-WIPO APPLICATION NO. PCT/IN2022/050901] & [INDIAN PATENT APPLICATION NO. 202111045696].
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Basu U, Parida SK (2021) AN ABC TRANSPORTER GENE MODULATING GLUTATHIONE CONJUGATES TRANSPORT AND UTILIZATION THEREOF [INDIAN PATENT APPLICATION NO. 5467IN004].
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| Research in News |
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Development of First-ever 90K Pan-genome SNP Genotyping Arrays, "Indian Rice panArray (IndRA)" and "Indian Chickpea panArray (IndiCA)" appeared in the latest released E-book (Cutting-Edge Technologies Impacting Agriculture and Allied Areas, Page 18) by the DBT, Ministry of Science & Technology, Government of India https://dbtindia.gov.in/latest-announcement/cutting-edge-technology-agriculture-and-allied-areas
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SNP Arrays are released by Honourable Minister of Science & Technology Dr. Jitendra Singh Oct 8, 2021 for National Use. This technology has commercialized with Affymetrix Technologies, USA (Thermo Fisher Scientific, USA & Imperial Life Sciences, Gurgaon) for designing universal array for large-scale SNP genotyping applications in rice and chickpea.
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