| Chakraborty A., Singh B., Pandey V., Parida SK., Bhatia
S (2024). MicroRNA164e suppresses NAC100
transcription factor mediated synthesis of seed storage proteins in
chickpea. New Phytologist doi:10.1111/nph.19770 |
| Singh, B., Singh, S., Mahato, A.K., Dikshit, H.K., Tripathi, K. and
Bhatia, S., (2023) Delineation of novel genomic loci
and putative candidate genes associated with seed iron and zinc content
in lentil (Lens culinaris Medik.). Plant Science, 335,
p.111787.
|
| Junaid A, Singh B and Bhatia S. (2023) Evolutionary
insights into 3D genome organization and epigenetic landscape of
Vigna mungo. Life Science Alliance Vol7, no.1
e202302074 (DOI:10.26508/lsa.202302074)
|
| Chakraborty A, Junaid A, Parida SK, Bhatia S (2023)
Integrated genomic approaches delineate a novel role of ROP1 ENHANCER1
in controlling seed protein content of chickpea. J Exp
Bot 74 (3): 817-834 (doi.org/10.1093/jxb/erac452) |
| Singh, G., Ambreen, H., Jain, P., Chakraborty, A., Singh, B.,
Manivannan, A., Bhatia, S. (2023) Comparative
transcriptomic and metabolite profiling reveals genotype-specific
responses to Fe starvation in chickpea. Physiologia
Plantarum, 175( 2), e13897. https://doi.org/10.1111/ppl.13897 |
| Padhy A.K, Kaur P, Singh B, Kaur R, Bhatia S, Shamshad
M, Sharma H, Kaur S, Srivastava P & Sharma A (2023) In silico
characterization of Thinopyrum elongatum-derived PsyE1 gene and
validation in 7D/7E bread wheat introgression lines open avenues for
carotenoid biofortification in wheat. CEREAL RESEARCH
COMMUNICATIONS 51, 75-85. https://doi.org/10.1007/s42976-022-00279-w
|
| Tiwari M, Yadav M, Singh B, Pandey V, Nawaz K, and Bhatia
S (2021) Evolutionary and functional analysis of
Two-Component System in chickpea reveals CaRR13, a TypeB RR, as positive
regulator of symbiosis. Plant Biotechnol. J., https://doi.org/10.1111/pbi.13649 |
| Tiwari M, Pandey V, Singh B, Yadav M, Bhatia S* (2021).
Evolutionary and expression dynamics of LRR-RLKs and functional
establishment of KLAVIER homolog in shoot mediated regulation of AON in
chickpea symbiosis. Genomics:
https://doi.org/10.1016/j.ygeno.2021.11.022 |
| Tiwari M, Singh B, Yadav M, Pandey V, Bhatia S (2021)
High throughput identification of miRNAs reveal novel interacting
targets regulating chickpea-rhizobia symbiosis.
Environmental and Experimental Botany 186 (104469)
|
| Pradhan S, Verma S, Chakraborty A, Bhatia S (2021)
Identification and molecular characterization of miRNAs and their target
genes associated with seed development through small RNA sequencing in
chickpea. Funct Integr Genomics: 21(2):283-298. doi:
10.1007/s10142-021-00777-w. Epub 2021 Feb 25. PMID: 33630193 |
| Tiwari M, Pandey V, Singh B, Bhatia S (2020) Dynamics of miRNA mediated
regulation of legume symbiosis. Plant Cell Environ. https://doi.org/10.1111/pce.13983 |
| Gaur R, Verma S, Pradhan S, Ambreen H, Bhatia S (2020)
A high density SNP-based linkage map using Genotyping-by-Sequencing and
its utilization for improved genome assembly of chickpea (Cicer
arietinum L.). Funct Integr Genomics DOI
10.1007/s10142-020-00751-y |
| Tiwari M, Bhatia S. (2019) Expression profiling of
miRNAs indicates crosstalk between phytohormonal response and rhizobial
infection in chickpea. J. Plant Biochem.
Biotechnol. https://doi.org/10.1007/s13562-019-00545-9
|
| Verma S, Bhatia S (2019) A comprehensive analysis of
the B3 superfamily identifies tissue-specific and stress-responsive
genes in chickpea (Cicer arietinum L.) 3
Biotech (2019) 9: 346. https://doi.org/10.1007/s13205-019-1875-5
|
| Verma S & Bhatia S (2018) Analysis of genes
encoding seed storage proteins (SSPs) in chickpea (Cicer arietinum
L.) reveals co-expressing transcription factors and a seed-specific
promoter. Functional & Integrative Genomics:
doi.org/10.1007/s10142-018-0650-8 (Accepted)(IF: 3.9) |
| Berger A, Brouquisse R, Pathak PK, Hichri I, Singh I, Bhatia
S, Boscari A, Igamberdiev AU, Gupta KJ (2018) Pathways of
nitric oxide metabolism and operation of phytoglobins in legume nodules:
Missing links and future directions. Plant Cell
Environ.; 1-12. https://doi.org/10.1111/ pce.13151 (IF:
6.173) |
| Pradhan S, Kant C, Verma S, Bhatia S (2017) Genome-wide
analysis of the CCCH zinc finger family identifies tissue specific and
stress responsive candidates in chickpea (Cicer arietinum L.).
PLoS ONE 12(7): e0180469. https://doi.org/10.1371/journal.pone.0180469
(IF: 3.0)
|
| Kumar S and Bhatia S (2016) A polymorphic (GA/CT)n- SSR
influences promoter activity of Tryptophan
decarboxylase gene in Catharanthus
roseus L. Don. Scientific Reports
6: 33280. |
| Kant C, Pradhan S and Bhatia S
(2016) Dissecting the root nodule transcriptome of
chickpea (Cicer arietinum L.). PLoS One
doi: 10.1371/journal.pone.0157908 (IF: 3.0) |
| Garg R, Shankar R, Thakkar B, Kudapa H, Krishnamurthy L, Mantri N,
Varshney R, Bhatia S & Jain M (2016) Transcriptome
analyses reveal genotype- and developmental stage-specific molecular
responses to drought and salinity stresses in chickpea.
Scientific Reports | 6:19228 | DOI:
10.1038/srep19228 (IF: 5.2) |
| Verma S, Gupta S, Bandhiwal N, Kumar T, Bharadwaj C & Bhatia
S (2015) High-density linkage map construction and mapping
of seed trait QTLs in chickpea (Cicer arietinum L.) using
Genotyping-by-Sequencing (GBS). Scientific Reports
5, 17512; doi: 10.1038/srep17512. (IF: 5.2)
|
| Gupta S, Kumar T, Verma S, Bharadwaj C & Bhatia S.
(2015) Development of gene-based markers for use in construction of the
chickpea (Cicer arietinum L.) genetic linkage map and
identification of QTLs associated with seed weight and plant
height. Mol Biol Rep, 1-10, doi:
10.1007/s11033-015-3925-3. (IF: 1.68) |
| Verma P, Goyal R, Chahota RK, Sharma TR, Abdin MZ & Bhatia S
(2015) Construction of a genetic linkage map
and identification of QTLs for seed weight and seed size traits in
lentil (Lens culinaris Medik.) PlosOne,
DOI:10.1371/journal.pone.0139666 October 5, 2015 (IF: 3.0) |
| Gaur R, Jeena G, Shah N, Gupta S, Pradhan S, Tyagi AK, Jain M,
Chattopadhyay D & Bhatia S (2015): High density
linkage mapping of genomic and transcriptomic SNPs for synteny analysis
and anchoring the genome sequence of chickpea. Scientific
Reports 5, 13387; doi: 10.1038/srep 13387. (IF : 5.2 ) |
| Parween S, Nawaz K, Roy R, Pole AK, Suresh BV, Misra G, Jain M, Yadav G,
Parida SK, Tyagi AK, Bhatia S & Chattopadhyay D
(2015) An advanced draft genome assembly of a desi type chickpea
(Cicer arietinum L.). Scientific Reports 5,
12806; doi: 10.1038/srep12806. (IF : 5.2) |
| Kumar S, Bhatia S (2015) Isolation of
Catharanthus roseus (L.) G. Don nuclei and measurement of rate
of Tryptophan decarboxylase gene transcription using nuclear run-on
transcription assay. PlosOne,
DOI:10.1371/journal.pone.0127892 May 29, 2015. (IF :
3.0)
|
| Kumar T, Bharadwaj C, Alam A, Singh P, Singhal T, Chauhan SK,
Bhatia S, Sarker A (2015) Development and
characterization of Recombinant Inbred Lines for seed related traits in
chickpea. IJTA, 33(2): 639 – 642. (NAAS rating
3.03)
|
| Khajuria YP, Saxena , M.S., Gaur, R., Chattopadhyay, D., Jain,
M., Parida, S.K., Bhatia, S. (2015) Development and
integration of genome-wide polymorphic microsatellite markers onto a
reference linkage map for constructing a high-density genetic map of
chickpea. PlosOne, DOI: 10.1371/journal.pone.0125583.
(IF : 3.6) |
| Gupta S, Garg V, Bhatia S (2015): A new set of ESTs
from chickpea (Cicer arietinum L.) embryo reveals two novel
F-box genes, CarF-box_PP2 and CarF-box_LysM, with
potential roles in seed development. Plos One (DOI:
10.1371/journal.pone.0121100) (IF : 3.0) |
| Gupta S, Garg V, Kant C, Bhatia S (2015): Genome-wide
survey and expression analysis of F-box genes in chickpea. BMC
Genomics (DOI: 10.1186/s12864-015-1293-y). (IF: 3.8) |
| Verma P, Chandra A, Roy AK, Malaviya D R, Kaushal P, Pandey D, Bhatia S
(2015): Development, characterization and cross-species transferability
of genomic SSR markers in berseem (Trifolium alexandrinum L.),
an important multi-cut annual forage legume. Molecular
Breeding (DOI 10.1007/s11032-015-0223-7). (IF: 2.1) |
| Pradhan S, Bandhiwal N, Shah N, Kant C, Gaur R, Bhatia S (2014): Global
transcriptome analysis of developing chickpea (Cicer arietinum
L.) seeds. Frontiers in Plant Science Vol 5, Article
698 (doi: 10.3389/fpls.2014.00698) . (IF: 4.59) |
| Misra G, Priya P, Bandhiwal N, Bareja N, Jain M, Bhatia
S, Chattopadhyay D, Tyagi AK, Yadav G (2014): The Chickpea
Genomic Web Resource: Visualization and Analysis of the Desi-type
Cicer arietinum Nuclear Genome for Comparative Exploration of
Legumes. BMC Plant Biology (DOI:
10.1186/s12870-014-0315-2). (IF: 3.6)
|
| Verma P, Sharma TR, Srivastava PS, Abdin MZ, Bhatia S
(2014) Exploring genetic variability within lentil (Lens
culinaris Medik.) and across related legumes using a newly
developed set of microsatellite markers. Mol Biol Rep.
41(9):5607-25 (DOI 10.1007/s11033-014-3431-z). (IF: 1.69) |
| Shrivastava D, Verma P, Bhatia S (2014) Expanding the
repertoire of microsatellite markers for polymorphism studies in Indian
accessions of mung bean (Vigna radiata L. Wilczek). Mol
Biol Rep. 41(9):5669-80 (DOI
10.1007/s11033-014-3436-7). (IF: 1.69) |
| Kumar S, Shah N, Garg V, Bhatia S (2014) Large scale
in-silico identification and characterization of simple
sequence repeats (SSRs) from de novo assembled transcriptome of
Catharanthus roseus (L.) G. Don. Plant Cell
Reports 33:905–918 (DOI 10.1007/s00299-014-1569-8). (IF:
3.08)
|
| Gaur R, Bhatia S, Gupta M
(2014) Generation of expressed sequence tags under cadmium stress for
gene discovery and development of molecular markers in chickpea.
Protoplasma 251: 955-72. (DOI:
10.1007/s00709-013-0609-5). (IF: 2.34)
|
| Varshney RK, Mir RR, Bhatia S, Thudi M, Hu Y, Azam S,
Zhang Y, Jaganathan D, You FM, Gao J, Riera-Lizarazu O, Luo M-C (2014)
Integrated physical, genetic and genome map of chickpea (Cicer
arietinum L.) Funct Integr Genomics
14(1):59-73 (DOI 10.1007/s10142-014-0363-6). (IF: 2.26) |
| Verma P, Shah N and Bhatia S (2013) Development of an
expressed gene catalogue and molecular markers from the de novo
assembly of short sequence reads of the lentil (Lens culinaris
Medik.) transcriptome. Plant Biotech. J. 11:
894-905 (doi: 10.1111/pbi.12082). (IF: 6.09)
|
| Jain M, Misra G, Patel RK, Priya P, Jhanwar S, Khan AW, Shah N, Singh
VK, Garg R, Jeena G, Yadav M, Chandra Kant, Sharma P, Yadav G,
Bhatia S, Tyagi AK, Chattopadhyay D (2013) A draft
genome sequence of the pulse crop chickpea (Cicer arietinum
L.). Plant J. 74: 715-729
(DOI: 10.1111/tpj.12173). (IF: 6.28)
|
| Gaur R, Azam S, Jeena G, Khan AW, Choudhary S, Jain M, Yadav G, Tyagi
AK, Chattopadhyay D, Bhatia S (2012) High-throughput
SNP discovery and genotyping for constructing a saturated linkage map of
chickpea (Cicer arietinum L.). DNA Research,
19:357–373 (doi: 10.1093/dnares/dss018). (IF: 5.47) |
| Choudhary S, Gaur R., Gupta S, Bhatia S (2012)
EST-derived genic molecular markers: development and utilization for
generating an advanced transcript map of chickpea. Theor. Appl.
Genet. 124: 1449-1462 (DOI 10.1007/s00122-012-1800-3). (IF:
3.9) |
| Gupta M, Verma B, Kumar N, Chahota RK , Rathour R, Sharma SK ,
Bhatia S, Sharma TR (2012) Construction of
intersubspecific molecular genetic map of lentil based on ISSR, RAPD and
SSR markers. Jour. Genet. 12, 91(3):279-87. (IF: 1.1)
|
| Shokeen B, Choudhary S, Sethy NK, Bhatia S (2011)
Development of SSR and gene-targeted markers for construction of a
framework linkage map of Catharanthus roseus. Ann.
Bot., London, 108, 321–336. (IF: 4.0) |
| Garg R, Patel RK, Jhanwar S, Priya P, Bhattacharjee A, Yadav G,
Bhatia S, Chattopadhyay D, Tyagi AK, Jain M (2011) Gene
discovery and tissue-specific transcriptome analysis in chickpea with
massively parallel pyrosequencing and web resource development,
Plant Physiol., 156: 1661–1678. (IF: 8.03)
|
| Chaudhary S, Sharma V, Prasad Manoj, Bhatia S, Tripathi
BN, Yadav Gitanjali, Kumar S (2011). Characterization and genetic
linkage mapping of the horticulturally important mutation leafless
inflorescence (lli) in periwinkle Catharanthus roseus.
Scientia Horticulturae 129: 142-153, DOI :
10.1016/j.scientia.2011.02.025. (IF: 1.53)
|
| Gaur R, Sethy NK, Choudhary S, Gupta V, Shokeen B, Bhatia
S (2011) Advancing the STMS genomic resources and defining
their locations on the intra-specific genetic linkage map of chickpea
(Cicer arietinum L.) BMC Genomics 12: 117.
(IF: 4.4) |
| Gujaria N, Kumar A, Dauthal P, Dubey A, Hiremath P, Bhanu Prakash A,
Farmer A, Bhide M, Shah T, Gaur P, Upadhyaya H D, Bhatia
S, Cook D R, May G D, Varshney R K (2011) Development and
use of genic molecular markers (GMMs) for constructing a transcript map
of chickpea (Cicer arietinum L.) Theor. Appl.
Genet. 122: 1577-1589 (DOI 10.1007/s00122-011-1556-1). (IF:
3.86) |
| Gupta V, Bhatia S, Mohanty NA, Sethy N, Tripathy BC
(2010) Comparative analysis of photosynthetic and biochemical
characteristics of Desi and Kabuli genepools of chickpea (Cicer
arietinum L.) Int. Jour of Genetic Engineering and
Biotechnology. Vol 1, Num 1, 65 – 76. |
| Choudhary S, Sethy NK, Shokeen B, Bhatia S (2009)
Development of chickpea EST-SSR markers and analysis of allelic
variation across related species. Theor Appl Genet
118:591–608 (DOI10.1007/s00122-008-0923-z). (IF: 3.9) |
| Shokeen B, Sethy NK, Kumar S, Bhatia S (2007) Isolation
and characterization of microsatellite markers for analysis of molecular
variation in the medicinal plant Madagascar periwinkle (Catharanthus
roseus (L.) G. Don.). Plant Science 172: 441 –
451. (IF: 3.36) |
| Sethy NK, ShokeenB, Edwards KJ, Bhatia S (2006)
Development of microsatellite markers and analysis of intraspecific
genetic variability in chickpea (Cicer arietinum L.).
Theor. and Appl. Genet. 112:1426 -1428. (IF: 3.9)
|
| Sethy NK, Choudhary S, Shokeen B, Bhatia S (2006):
Identification of microsatellite markers from Cicer
reticulatum: molecular variation and phylogenetic analysis.
Theor. Appl. Genet. 112: 347-357. (IF: 3.9)
|
| Choudhary S, Sethy NK, Shokeen B, Bhatia S (2006):
Development of sequence-tagged microsatellite site markers for chickpea
(Cicer arietinum L.). Mol Ecol. Notes 6(1): 93-95. (IF:
Currently Mol. Ecol.Res. : 5.3) |
| Shokeen B, Sethy NK, Choudhary S, Bhatia S (2005):
Development of STMS markers from the medicinal plant Madagascar
periwinkle (Catharanthus roseus (L.) G. Don.) Mol Ecol.
Notes 5, 818-820 (IF: Currently Mol. Ecol.Res. : 5.3) |
| Sethy NK, Shokeen B, Bhatia S (2003): Isolation and
characterization of sequence-tagged microsatellite sites (STMS) markers
in chickpea (Cicer arietinum L.). Mol Ecol.
Notes, 3, 428-430. (IF: Currently Mol. Ecol.Res. : 5.3)
|
| Rajagopal J, Bashyam L, Bhatia S, Khurana DK,
Srivastava PS, Lakshmikumaran M (2000): Evaluation of genetic diversity
in the Himalayan Poplar using RAPD markers. Silvae
Genetica 49(2): 60-66 |
| Singh A, Negi MS, Rajagopal J, Bhatia S, Tomar UK,
Srivastava PS, Lakshmikumaran M (1999). Assessment of genetic diversity
in Azadirachta indica using AFLP markers. Theor Appl
Genet. 99(1/2): 272-279 |
| Das S, Rajagopal J, Bhatia S, Srivastava PS,
Lakshmikumaran M (1999). Assessment of genetic variation within
Brassica campestris cultivars using AFLP and RAPD markers.
J. of Biosciences 24(4), 433-440.
|
| Bhatia S, Negi MS, Lakshmikumaran M (1996) Structural
Analysis of the rDNA Intergenic Spacer of Brassica nigra: Evolutionary
Divergence of the Spacers of the Three Diploid Brassica Species.
Journal of Molecular Evolution 43(5): 460-468.
|
| Bhatia S, Das S, Jain A, Lakshmikumaran M (1995) DNA
fingerprinting of Brassica juncea cultivars using microsatellite probes.
Electrophoresis 16: 1750-1754
|
| Jain A, Bhatia S, Banga SS, Prakash S, Lakshmikumaran M
(1994) Potential use of the random amplified polymorphic DNA (RAPD) to
study the genetic diversity in Indian mustard (Brassica juncea) and its
relationship to heterosis. Theor Appl Genet 88:
116-122. |
| Singh K, Bhatia S, Lakshmikumaran M (1994) Novel
variants of the 5S rRNA genes in Eruca sativa. Genome
37: 121-128 |
| Bhatia S, Singh K, Jagannathan V, Lakshmikumaran M
(1993): Organization and analysis of the 5S rRNA genes in B. campestris.
Plant Science 92: 47-55
|
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