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RESULT: VISUALIZATION AND ANALYSIS
I. NETWORK VISUALIZATION
FOR GRAPHICAL REPRESENTATION OF NETWORK AND ITS PROPERTIES
II. SIMULATE SINGLE PERTURBATION
VIEW EFFECT OF
INTERACTION LOSS
RANDOM LOSS
PROTEIN LOSS
ON
Q0045
Q0105
Q0115
Q0120
Q0275
TD_GUC_B
TD_GUC_D
TD_GUC_G1
TD_GUC_G2
TD_GUC_I1
TD_GUC_I2
TD_GUC_J1
TD_GUC_J2
TD_GUC_J3
TD_GUC_J4
TD_GUC_K
TD_GUC_L1
TD_GUC_L2
TD_GUC_M
TD_GUC_N
TD_GUC_O
TD_GUC_Q
TE_CUC_D
TE_CUC_I
TE_UUC_B
TE_UUC_C
TE_UUC_E1
TE_UUC_E2
TE_UUC_E3
TE_UUC_G1
TE_UUC_G2
TE_UUC_G3
TE_UUC_I
TE_UUC_J
TE_UUC_K
TE_UUC_L
TE_UUC_M
TE_UUC_P
TI_UAU_L
TL_UAA_Q
TM_CAU_C
TM_CAU_Q1
TN_GUU_O1
TR_ACG_D
TR_ACG_E
TR_ACG_J
TR_ACG_K
TR_ACG_L
TR_ACG_O
TR_ACG_Q2
TR_CCG_L
TR_UCU_B
TR_UCU_D
TR_UCU_E
TR_UCU_G1
TR_UCU_G2
TR_UCU_G3
TR_UCU_J1
TR_UCU_J2
TR_UCU_K
TR_UCU_M1
TR_UCU_M2
TR_UCU_Q1
XBP1
YAL001C
YAL022C
YAL028W
YAL034C
YAL038W
YAL040C
YAR003W
YAR042W
YAR066W
YBL014C
YBL026W
YBL032W
YBL037W
YBL042C
YBL066C
YBL071W_A
YBL072C
YBL081W
YBL089W
YBL091C_A
YBL104C
YBR004C
YBR029C
YBR057C
YBR082C
YBR083W
YBR086C
YBR105C
YBR123C
YBR130C
YBR175W
YBR222C
YBR235W
YBR237W
YBR239C
YBR258C
YBR279W
YCR012W
YCR034W
YCR061W
YCR067C
YCR077C
YCR089W
YCR107W
YDL037C
YDL039C
YDL042C
YDL078C
YDL109C
YDL110C
YDL111C
YDL117W
YDL124W
YDL127W
YDL140C
YDL160C
YDL180W
YDL182W
YDL184C
YDL195W
YDL206W
YDL209C
YDL224C
YDR011W
YDR033W
YDR038C
YDR039C
YDR040C
YDR046C
YDR052C
YDR072C
YDR085C
YDR143C
YDR150W
YDR156W
YDR184C
YDR205W
YDR228C
YDR231C
YDR243C
YDR249C
YDR255C
YDR310C
YDR341C
YDR362C
YDR378C
YDR420W
YDR422C
YDR425W
YDR432W
YDR441C
YDR451C
YDR481C
YDR508C
YDR524C
YDR541C
YEL004W
YEL018W
YEL026W
YEL034W
YEL039C
YEL040W
YEL043W
YEL063C
YEL065W
YER019W
YER020W
YER028C
YER064C
YER112W
YER144C
YER146W
YER172C
YFL026W
YFL031W
YFL039C
YFR017C
YFR029W
YFR033C
YFR036W
YFR048W
YFR053C
YGL005C
YGL008C
YGL028C
YGL055W
YGL056C
YGL071W
YGL077C
YGL103W
YGL125W
YGL127C
YGL162W
YGL178W
YGL181W
YGL190C
YGL197W
YGL209W
YGL236C
YGL244W
YGL245W
YGL249W
YGL254W
YGR023W
YGR035C
YGR047C
YGR055W
YGR077C
YGR096W
YGR097W
YGR108W
YGR109C
YGR146C
YGR166W
YGR183C
YGR189C
YGR222W
YGR243W
YGR254W
YGR284C
YHL008C
YHL012W
YHL029C
YHL036W
YHL038C
YHR006W
YHR048W
YHR079C
YHR082C
YHR094C
YHR096C
YHR102W
YHR119W
YHR128W
YHR138C
YHR143W
YHR155W
YHR165C
YHR181W
YIL006W
YIL021W
YIL023C
YIL056W
YIL101C
YIL122W
YIR021W
YIR032C
YJL016W
YJL019W
YJL025W
YJL056C
YJL058C
YJL080C
YJL082W
YJL090C
YJL094C
YJL096W
YJL124C
YJL129C
YJL137C
YJL144W
YJL163C
YJL187C
YJL194W
YJL212C
YJR004C
YJR008W
YJR021C
YJR032W
YJR044C
YJR047C
YJR056C
YJR073C
YJR091C
YJR115W
YJR117W
YJR130C
YJR143C
YJR153W
YKL004W
YKL015W
YKL018W
YKL081W
YKL130C
YKL163W
YKL164C
YKL185W
YKR021W
YKR044W
YKR052C
YKR059W
YKR075C
YKR077W
YKR079C
YKR099W
YLL009C
YLL013C
YLL028W
YLL031C
YLR018C
YLR034C
YLR040C
YLR073C
YLR094C
YLR116W
YLR130C
YLR131C
YLR180W
YLR187W
YLR249W
YLR295C
YLR297W
YLR332W
YLR337C
YLR344W
YLR347C
YLR375W
YLR380W
YLR382C
YLR413W
YLR414C
YLR418C
YLR438C_A
YLR448W
YLR452C
YML020W
YML027W
YML035C
YML043C
YML051W
YML058W
YML064C
YML073C
YML113W
YML118W
YML123C
YMR008C
YMR036C
YMR070W
YMR080C
YMR122W_A
YMR129W
YMR139W
YMR165C
YMR179W
YMR182C
YMR209C
YMR215W
YMR229C
YMR230W
YMR236W
YMR239C
YMR274C
YMR296C
YMR305C
YNL042W
YNL046W
YNL053W
YNL068C
YNL071W
YNL074C
YNL080C
YNL081C
YNL125C
YNL145W
YNL147W
YNL156C
YNL176C
YNL191W
YNL197C
YNL201C
YNL210W
YNL238W
YNL268W
YNL277W
YNL278W
YNL281W
YNL298W
YNL300W
YNL305C
YNL309W
YNL316C
YNL321W
YNL322C
YNL326C
YNL327W
YNL328C
YNR009W
YNR014W
YNR030W
YNR039C
YNR044W
YNR046W
YNR047W
YNR067C
YOL007C
YOL036W
YOL063C
YOL078W
YOL086C
YOL128C
YOL145C
YOR044W
YOR049C
YOR052C
YOR058C
YOR062C
YOR085W
YOR098C
YOR110W
YOR120W
YOR123C
YOR129C
YOR137C
YOR147W
YOR149C
YOR171C
YOR172W
YOR226C
YOR269W
YOR288C
YOR294W
YOR298C_A
YOR301W
YOR307C
YOR308C
YOR316C
YOR359W
YOR372C
YPL006W
YPL007C
YPL039W
YPL049C
YPL068C
YPL069C
YPL089C
YPL113C
YPL116W
YPL125W
YPL128C
YPL131W
YPL135W
YPL137C
YPL138C
YPL141C
YPL162C
YPL165C
YPL188W
YPL256C
YPL265W
YPR042C
YPR083W
YPR119W
YPR120C
YPR138C
YPR149W
YPR166C
YPR181C
:-
III. SIMULATE CLUSTERED PERTURBATIONS
SELECT
Two
Five
Seven
Nine
PROTEINS FROM NETWORK BASED ON
USER SELECTION
Lowest Connectivity
Highest Connectivity
:-
IV. SIMULATE SEQUENTIAL PERTURBATIONS
RUN EXTINCTION SERIES BASED ON
Lowest To Highest
Highest To Lowest
Random
NUMBER OF PROTEIN INTERACTIONS :-
National Institute of Plant Genome Research